HL_7NWG_030
3D structure
- PDB id
- 7NWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GGAUGAAC
- Length
- 8 nucleotides
- Bulged bases
- 7NWG|1|51|A|1891, 7NWG|1|51|A|1892
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7NWG_030 not in the Motif Atlas
- Homologous match to HL_5TBW_026
- Geometric discrepancy: 0.2199
- The information below is about HL_5TBW_026
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_44398.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
7NWG|1|51|G|1886
7NWG|1|51|G|1887
7NWG|1|51|A|1888
7NWG|1|51|U|1889
7NWG|1|51|G|1890
7NWG|1|51|A|1891
7NWG|1|51|A|1892
7NWG|1|51|C|1893
Current chains
- Chain 51
- 28S Ribosomal RNA
Nearby chains
- Chain 71
- 5S ribosomal RNA; 5S rRNA
- Chain F3
- uL30
- Chain e3
- eL32
- Chain f3
- eL33
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