HL_7NWG_112
3D structure
- PDB id
- 7NWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GAUUGCAAUUAUUC
- Length
- 14 nucleotides
- Bulged bases
- 7NWG|1|A2|U|1621, 7NWG|1|A2|U|1622, 7NWG|1|A2|A|1623
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7NWG_112 not in the Motif Atlas
- Geometric match to HL_8KAH_003
- Geometric discrepancy: 0.3619
- The information below is about HL_8KAH_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_89457.1
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
7NWG|1|A2|G|1613
7NWG|1|A2|A|1614
7NWG|1|A2|U|1615
7NWG|1|A2|U|1616
7NWG|1|A2|G|1617
7NWG|1|A2|C|1618
7NWG|1|A2|A|1619
7NWG|1|A2|A|1620
7NWG|1|A2|U|1621
7NWG|1|A2|U|1622
7NWG|1|A2|A|1623
7NWG|1|A2|U|1624
7NWG|1|A2|U|1625
7NWG|1|A2|C|1626
Current chains
- Chain A2
- 18S Ribosomal RNA
Nearby chains
- Chain Q2
- 40S ribosomal protein uS19
- Chain T2
- 40S ribosomal protein uS13
- Chain U2
- S19
- Chain e2
- uS14
Coloring options: