HL_7NWG_130
3D structure
- PDB id
- 7NWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CCGCAGCAGG
- Length
- 10 nucleotides
- Bulged bases
- 7NWG|1|51|C|2794, 7NWG|1|51|G|2796, 7NWG|1|51|A|2798
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7NWG_130 not in the Motif Atlas
- Geometric match to HL_4V90_032
- Geometric discrepancy: 0.3742
- The information below is about HL_4V90_032
- Detailed Annotation
- tRNA D-loop
- Broad Annotation
- No text annotation
- Motif group
- HL_20811.4
- Basepair signature
- cWW-cWS-F
- Number of instances in this motif group
- 14
Unit IDs
7NWG|1|51|C|2791
7NWG|1|51|C|2792
7NWG|1|51|G|2793
7NWG|1|51|C|2794
7NWG|1|51|A|2795
7NWG|1|51|G|2796
7NWG|1|51|C|2797
7NWG|1|51|A|2798
7NWG|1|51|G|2799
7NWG|1|51|G|2800
Current chains
- Chain 51
- 28S Ribosomal RNA
Nearby chains
- Chain C3
- uL4
- Chain P3
- uL22
- Chain j3
- Ribosomal protein L37
- Chain l3
- eL39
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