HL_7NWH_031
3D structure
- PDB id
- 7NWH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with eRF1 and eRF3 bound by Blasticidin S.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.1 Å
Loop
- Sequence
- UGUAACAA
- Length
- 8 nucleotides
- Bulged bases
- 7NWH|1|5|A|2009
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7NWH_031 not in the Motif Atlas
- Homologous match to HL_8C3A_028
- Geometric discrepancy: 0.4037
- The information below is about HL_8C3A_028
- Detailed Annotation
- GNRA wlth tandem sheared
- Broad Annotation
- No text annotation
- Motif group
- HL_27115.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 22
Unit IDs
7NWH|1|5|U|2006
7NWH|1|5|G|2007
7NWH|1|5|U|2008
7NWH|1|5|A|2009
7NWH|1|5|A|2010
7NWH|1|5|C|2011
7NWH|1|5|A|2012
7NWH|1|5|A|2013
Current chains
- Chain 5
- 28S Ribosomal RNA
Nearby chains
- Chain ii
- Eukaryotic peptide chain release factor subunit 1
- Chain m
- 60S RIBOSOMAL PROTEIN EL40
- Chain s
- 60S acidic ribosomal protein P0
- Chain t
- uL12
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