HL_7NWW_012

3D structure

PDB id

7NWW (explore in PDB, NAKB, or RNA 3D Hub)

Description

CspA-27 cotranslational folding intermediate 1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

ACACGUGGUAU

Length

11 nucleotides

Bulged bases

7NWW|1|1|G|386, 7NWW|1|1|G|389

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NWW_012 not in the Motif Atlas

Homologous match to HL_5J7L_145

Geometric discrepancy: 0.1092

The information below is about HL_5J7L_145

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

7NWW|1|1|A|382
7NWW|1|1|C|383
7NWW|1|1|A|384
7NWW|1|1|C|385
7NWW|1|1|G|386
7NWW|1|1|U|387
7NWW|1|1|G|388
7NWW|1|1|G|389
7NWW|1|1|U|390
7NWW|1|1|A|391
7NWW|1|1|U|392

Current chains

Chain 1

23S rRNA

Nearby chains

Chain W

50S ribosomal protein L28