3D structure

PDB id
7NWW (explore in PDB, NAKB, or RNA 3D Hub)
Description
CspA-27 cotranslational folding intermediate 1
Experimental method
ELECTRON MICROSCOPY
Resolution
3.05 Å

Loop

Sequence
UUUAUUAAAAA
Length
11 nucleotides
Bulged bases
7NWW|1|1|A|1780, 7NWW|1|1|U|1781, 7NWW|1|1|U|1782, 7NWW|1|1|A|1786
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7NWW_045 not in the Motif Atlas
Homologous match to HL_4WF9_043
Geometric discrepancy: 0.0903
The information below is about HL_4WF9_043
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_01962.2
Basepair signature
cWW-tWH-tWH-F
Number of instances in this motif group
6

Unit IDs

7NWW|1|1|U|1777
7NWW|1|1|U|1778
7NWW|1|1|U|1779
7NWW|1|1|A|1780
7NWW|1|1|U|1781
7NWW|1|1|U|1782
7NWW|1|1|A|1783
7NWW|1|1|A|1784
7NWW|1|1|A|1785
7NWW|1|1|A|1786
7NWW|1|1|A|1787

Current chains

Chain 1
23S rRNA

Nearby chains

Chain B
7.4 kDa cold shock protein
Chain C
50S ribosomal protein L2
Chain c
50S ribosomal protein L34

Coloring options:


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