HL_7O19_008

3D structure

PDB id

7O19 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophan

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

AACUGAGACACGGU

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7O19_008 not in the Motif Atlas

Homologous match to HL_5J7L_008

Geometric discrepancy: 0.0935

The information below is about HL_5J7L_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81205.3

Basepair signature

cWW-cWW-tWH-F-tWH-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

7O19|1|AA|A|320
7O19|1|AA|A|321
7O19|1|AA|C|322
7O19|1|AA|U|323
7O19|1|AA|G|324
7O19|1|AA|A|325
7O19|1|AA|G|326
7O19|1|AA|A|327
7O19|1|AA|C|328
7O19|1|AA|A|329
7O19|1|AA|C|330
7O19|1|AA|G|331
7O19|1|AA|G|332
7O19|1|AA|U|333

Current chains

Chain AA

Ribosomal RNA 16S

Nearby chains

Chain AP

30S ribosomal protein S16

Chain AT

30S ribosomal protein S20