HL_7O19_084

3D structure

PDB id

7O19 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophan

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GGUAAGUUC

Length

9 nucleotides

Bulged bases

7O19|1|BA|U|1955

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7O19_084 not in the Motif Atlas

Homologous match to HL_5J7L_182

Geometric discrepancy: 0.0678

The information below is about HL_5J7L_182

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_20167.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

10

Unit IDs

7O19|1|BA|G|1949
7O19|1|BA|G|1950
7O19|1|BA|U|1951
7O19|1|BA|A|1952
7O19|1|BA|A|1953
7O19|1|BA|G|1954
7O19|1|BA|U|1955
7O19|1|BA|U|1956
7O19|1|BA|C|1957

Current chains

Chain BA

Ribosomal RNA 23S

Nearby chains

Chain AA

Small subunit ribosomal RNA; SSU rRNA

Chain BK

50S ribosomal protein L14