HL_7O1A_047

3D structure

PDB id

7O1A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

ACACGUGGUAU

Length

11 nucleotides

Bulged bases

7O1A|1|BA|G|386, 7O1A|1|BA|G|389

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7O1A_047 not in the Motif Atlas

Homologous match to HL_5J7L_145

Geometric discrepancy: 0.0749

The information below is about HL_5J7L_145

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

7O1A|1|BA|A|382
7O1A|1|BA|C|383
7O1A|1|BA|A|384
7O1A|1|BA|C|385
7O1A|1|BA|G|386
7O1A|1|BA|U|387
7O1A|1|BA|G|388
7O1A|1|BA|G|389
7O1A|1|BA|U|390
7O1A|1|BA|A|391
7O1A|1|BA|U|392

Current chains

Chain BA

Ribosomal RNA 23S

Nearby chains

Chain BX

50S ribosomal protein L28