HL_7O1C_021
3D structure
- PDB id
- 7O1C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome-RF2 complex stalled in response to L-tryptophan
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GAU(2MG)(5MC)AACGC
- Length
- 10 nucleotides
- Bulged bases
- 7O1C|1|AA|A|968, 7O1C|1|AA|G|971
- QA status
- Modified nucleotides: 2MG, 5MC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7O1C_021 not in the Motif Atlas
- Homologous match to HL_4LFB_021
- Geometric discrepancy: 0.1325
- The information below is about HL_4LFB_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_97521.1
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
7O1C|1|AA|G|963
7O1C|1|AA|A|964
7O1C|1|AA|U|965
7O1C|1|AA|2MG|966
7O1C|1|AA|5MC|967
7O1C|1|AA|A|968
7O1C|1|AA|A|969
7O1C|1|AA|C|970
7O1C|1|AA|G|971
7O1C|1|AA|C|972
Current chains
- Chain AA
- Ribosomal RNA 16S
Nearby chains
- Chain AI
- 30S ribosomal protein S9
- Chain AJ
- 30S ribosomal protein S10
- Chain AM
- 30S ribosomal protein S13
- Chain B8
- Transfer RNA; tRNA
- Chain B9
- Peptide chain release factor RF2
Coloring options: