HL_7O5B_030
3D structure
- PDB id
- 7O5B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a Bacillus subtilis MifM-stalled ribosome-nascent chain complex with (p)ppGpp-SRP bound
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.33 Å
Loop
- Sequence
- GAUCAGCAUGC
- Length
- 11 nucleotides
- Bulged bases
- 7O5B|1|A|U|1373
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7O5B_030 not in the Motif Atlas
- Homologous match to HL_5J7L_029
- Geometric discrepancy: 0.285
- The information below is about HL_5J7L_029
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_06226.4
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
7O5B|1|A|G|1365
7O5B|1|A|A|1366
7O5B|1|A|U|1367
7O5B|1|A|C|1368
7O5B|1|A|A|1369
7O5B|1|A|G|1370
7O5B|1|A|C|1371
7O5B|1|A|A|1372
7O5B|1|A|U|1373
7O5B|1|A|G|1374
7O5B|1|A|C|1375
Current chains
- Chain A
- 16S rRNA (1533-MER)
Nearby chains
- Chain I
- 30S ribosomal protein S9
- Chain J
- 30S ribosomal protein S10
- Chain N
- 30S ribosomal protein S14
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