HL_7OBR_024

3D structure

PDB id

7OBR (explore in PDB, NAKB, or RNA 3D Hub)

Description

RNC-SRP early complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GCCGCGCC

Length

8 nucleotides

Bulged bases

7OBR|1|5|C|1485

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OBR_024 not in the Motif Atlas

Geometric match to HL_8H9D_001

Geometric discrepancy: 0.2952

The information below is about HL_8H9D_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69752.1

Basepair signature

cWW-F

Number of instances in this motif group

8

Unit IDs

7OBR|1|5|G|1479
7OBR|1|5|C|1480
7OBR|1|5|C|1481
7OBR|1|5|G|1482
7OBR|1|5|C|1483
7OBR|1|5|G|1484
7OBR|1|5|C|1485
7OBR|1|5|C|1486

Current chains

Chain 5

28S rRNA

Nearby chains

Chain L

60S ribosomal protein L13

Chain i

60S ribosomal protein L36