HL_7OBR_049

3D structure

PDB id

7OBR (explore in PDB, NAKB, or RNA 3D Hub)

Description

RNC-SRP early complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

7OBR|1|5|U|2874

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OBR_049 not in the Motif Atlas

Geometric match to HL_7RQB_042

Geometric discrepancy: 0.1061

The information below is about HL_7RQB_042

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_03562.2

Basepair signature

cWW-tSW-F

Number of instances in this motif group

56

Unit IDs

7OBR|1|5|C|2872
7OBR|1|5|U|2873
7OBR|1|5|U|2874
7OBR|1|5|C|2875
7OBR|1|5|G|2876
7OBR|1|5|G|2877

Current chains

Chain 5

28S rRNA

Nearby chains

Chain n

60s ribosomal protein l41

Chain p

eL43