HL_7OBR_058

3D structure

PDB id

7OBR (explore in PDB, NAKB, or RNA 3D Hub)

Description

RNC-SRP early complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GCGCGCC

Length

7 nucleotides

Bulged bases

7OBR|1|5|C|4142, 7OBR|1|5|C|4144

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OBR_058 not in the Motif Atlas

Geometric match to HL_4V88_197

Geometric discrepancy: 0.3611

The information below is about HL_4V88_197

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_80922.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

4

Unit IDs

7OBR|1|5|G|4139
7OBR|1|5|C|4140
7OBR|1|5|G|4141
7OBR|1|5|C|4142
7OBR|1|5|G|4143
7OBR|1|5|C|4144
7OBR|1|5|C|4145

Current chains

Chain 5

28S rRNA

Nearby chains