HL_7OBR_075

3D structure

PDB id

7OBR (explore in PDB, NAKB, or RNA 3D Hub)

Description

RNC-SRP early complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CUCCCUCG

Length

8 nucleotides

Bulged bases

7OBR|1|5|U|5026, 7OBR|1|5|C|5027

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OBR_075 not in the Motif Atlas

Geometric match to HL_8C3A_039

Geometric discrepancy: 0.2687

The information below is about HL_8C3A_039

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

7OBR|1|5|C|5021
7OBR|1|5|U|5022
7OBR|1|5|C|5023
7OBR|1|5|C|5024
7OBR|1|5|C|5025
7OBR|1|5|U|5026
7OBR|1|5|C|5027
7OBR|1|5|G|5028

Current chains

Chain 5

28S rRNA

Nearby chains