HL_7ODR_008
3D structure
- PDB id
- 7ODR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State A of the human mitoribosomal large subunit assembly intermediate
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UGUAGCAAAA
- Length
- 10 nucleotides
- Bulged bases
- 7ODR|1|A|A|1957, 7ODR|1|A|A|1961
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7ODR_008 not in the Motif Atlas
- Homologous match to HL_7RQB_023
- Geometric discrepancy: 0.1225
- The information below is about HL_7RQB_023
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_39334.6
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 6
Unit IDs
7ODR|1|A|U|1954
7ODR|1|A|G|1955
7ODR|1|A|U|1956
7ODR|1|A|A|1957
7ODR|1|A|G|1958
7ODR|1|A|C|1959
7ODR|1|A|A|1960
7ODR|1|A|A|1961
7ODR|1|A|A|1962
7ODR|1|A|A|1963
Current chains
- Chain A
- 16S mitochondrial rRNA, DNA (31-MER),16S mitochondrial rRNA
Nearby chains
- Chain 2
- 39S ribosomal protein L34, mitochondrial
- Chain E
- 39S ribosomal protein L3, mitochondrial
- Chain T
- 39S ribosomal protein L22, mitochondrial
- Chain d
- 39S ribosomal protein L45, mitochondrial
Coloring options: