HL_7OE0_012

3D structure

PDB id

7OE0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli pre-30S delta rbfA ribosomal subunit class F

Experimental method

ELECTRON MICROSCOPY

Resolution

2.69 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OE0_012 not in the Motif Atlas

Geometric match to HL_8P9A_212

Geometric discrepancy: 0.3485

The information below is about HL_8P9A_212

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91620.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

6

Unit IDs

7OE0|1|A|G|462
7OE0|1|A|U|463
7OE0|1|A|U|464
7OE0|1|A|A|465
7OE0|1|A|A|466
7OE0|1|A|U|467
7OE0|1|A|A|468
7OE0|1|A|C|469
7OE0|1|A|C|470

Current chains

Chain A

16S rRNA

Nearby chains