HL_7OHQ_054
3D structure
- PDB id
- 7OHQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Nog1-TAP associated immature ribosomal particle population C from S. cerevisiae
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UUAAACGAUAACG
- Length
- 13 nucleotides
- Bulged bases
- 7OHQ|1|1|A|2637, 7OHQ|1|1|C|2644
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OHQ_054 not in the Motif Atlas
- Homologous match to HL_8C3A_056
- Geometric discrepancy: 0.4864
- The information below is about HL_8C3A_056
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_19870.9
- Basepair signature
- cWW-tHH-cWW-tHS-F-F-tWW
- Number of instances in this motif group
- 8
Unit IDs
7OHQ|1|1|U|2633
7OHQ|1|1|U|2634
7OHQ|1|1|A|2635
7OHQ|1|1|A|2636
7OHQ|1|1|A|2637
7OHQ|1|1|C|2638
7OHQ|1|1|G|2639
7OHQ|1|1|A|2640
7OHQ|1|1|U|2641
7OHQ|1|1|A|2642
7OHQ|1|1|A|2643
7OHQ|1|1|C|2644
7OHQ|1|1|G|2645
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain J
- 60S ribosomal protein L11-A
- Chain v
- Ribosome biogenesis protein RPF2
- Chain w
- Regulator of ribosome biosynthesis
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