HL_7OHS_034

3D structure

PDB id

7OHS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nog1-TAP associated immature ribosomal particle population F from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

4.38 Å

Loop

Sequence

CUUGUG

Length

6 nucleotides

Bulged bases

7OHS|1|1|U|3196, 7OHS|1|1|U|3198

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OHS_034 not in the Motif Atlas

Geometric match to HL_5TBW_044

Geometric discrepancy: 0.3583

The information below is about HL_5TBW_044

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81100.1

Basepair signature

cWW

Number of instances in this motif group

4

Unit IDs

7OHS|1|1|C|3194
7OHS|1|1|U|3195
7OHS|1|1|U|3196
7OHS|1|1|G|3197
7OHS|1|1|U|3198
7OHS|1|1|G|3199

Current chains

Chain 1

25S rRNA

Nearby chains

Chain H

60S ribosomal protein L9-A