HL_7OHW_037
3D structure
- PDB id
- 7OHW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL25 expression shut down, population B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- UGAAUUGCAGAAUUCCGUGAA
- Length
- 21 nucleotides
- Bulged bases
- 7OHW|1|2|U|82, 7OHW|1|2|C|84, 7OHW|1|2|U|86
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OHW_037 not in the Motif Atlas
- Geometric match to HL_3HJW_001
- Geometric discrepancy: 0.3944
- The information below is about HL_3HJW_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_18423.1
- Basepair signature
- cWW-tSH-tHS-F
- Number of instances in this motif group
- 1
Unit IDs
7OHW|1|2|U|69
7OHW|1|2|G|70
7OHW|1|2|A|71
7OHW|1|2|A|72
7OHW|1|2|U|73
7OHW|1|2|U|74
7OHW|1|2|G|75
7OHW|1|2|C|76
7OHW|1|2|A|77
7OHW|1|2|G|78
7OHW|1|2|A|79
7OHW|1|2|A|80
7OHW|1|2|U|81
7OHW|1|2|U|82
7OHW|1|2|C|83
7OHW|1|2|C|84
7OHW|1|2|G|85
7OHW|1|2|U|86
7OHW|1|2|G|87
7OHW|1|2|A|88
7OHW|1|2|A|89
Current chains
- Chain 2
- 5.8S rRNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain Y
- 60S ribosomal protein L26-A
- Chain h
- 60S ribosomal protein L35-A
- Chain j
- 60S ribosomal protein L37-A
Coloring options: