HL_7OHY_019

3D structure

PDB id

7OHY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL34 expression shut down, population B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CUGGAUG

Length

7 nucleotides

Bulged bases

7OHY|1|1|G|770

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OHY_019 not in the Motif Atlas

Geometric match to HL_5TBW_018

Geometric discrepancy: 0.3427

The information below is about HL_5TBW_018

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_84570.1

Basepair signature

cWW-cWW-F

Number of instances in this motif group

6

Unit IDs

7OHY|1|1|C|758
7OHY|1|1|U|759
7OHY|1|1|G|760
7OHY|1|1|G|770
7OHY|1|1|A|771
7OHY|1|1|U|772
7OHY|1|1|G|773

Current chains

Chain 1

25S rRNA

Nearby chains