HL_7OI6_008

3D structure

PDB id

7OI6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 1

Experimental method

ELECTRON MICROSCOPY

Resolution

5.7 Å

Loop

Sequence

GCGACAAAC

Length

9 nucleotides

Bulged bases

7OI6|1|A|A|321, 7OI6|1|A|A|324

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OI6_008 not in the Motif Atlas

Geometric match to HL_5TBW_021

Geometric discrepancy: 0.2504

The information below is about HL_5TBW_021

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_56443.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7OI6|1|A|G|318
7OI6|1|A|C|319
7OI6|1|A|G|320
7OI6|1|A|A|321
7OI6|1|A|C|322
7OI6|1|A|A|323
7OI6|1|A|A|324
7OI6|1|A|A|325
7OI6|1|A|C|326

Current chains

Chain A

16S rRNA

Nearby chains

Chain D

39S ribosomal protein L2, mitochondrial