HL_7OIC_031

3D structure

PDB id

7OIC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 4

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UGCAGCCG

Length

8 nucleotides

Bulged bases

7OIC|1|A|G|1346

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OIC_031 not in the Motif Atlas

Homologous match to HL_7RQB_061

Geometric discrepancy: 0.2974

The information below is about HL_7RQB_061

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91104.1

Basepair signature

cWW-F

Number of instances in this motif group

12

Unit IDs

7OIC|1|A|U|1345
7OIC|1|A|G|1346
7OIC|1|A|C|1347
7OIC|1|A|A|1348
7OIC|1|A|G|1349
7OIC|1|A|C|1350
7OIC|1|A|C|1351
7OIC|1|A|G|1352

Current chains

Chain A

16S rRNA

Nearby chains

Chain 4

39S ribosomal protein L36, mitochondrial