HL_7OID_021
3D structure
- PDB id
- 7OID (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 5A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- UUUACCAAAAA
- Length
- 11 nucleotides
- Bulged bases
- 7OID|1|A|A|830, 7OID|1|A|C|831, 7OID|1|A|C|832, 7OID|1|A|A|836
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OID_021 not in the Motif Atlas
- Homologous match to HL_7RQB_045
- Geometric discrepancy: 0.1657
- The information below is about HL_7RQB_045
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_43613.5
- Basepair signature
- cWW-tWH-tWH-F
- Number of instances in this motif group
- 6
Unit IDs
7OID|1|A|U|827
7OID|1|A|U|828
7OID|1|A|U|829
7OID|1|A|A|830
7OID|1|A|C|831
7OID|1|A|C|832
7OID|1|A|A|833
7OID|1|A|A|834
7OID|1|A|A|835
7OID|1|A|A|836
7OID|1|A|A|837
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain 2
- 39S ribosomal protein L34, mitochondrial
- Chain D
- 39S ribosomal protein L2, mitochondrial
Coloring options: