HL_7OIG_029

3D structure

PDB id

7OIG (explore in PDB, NAKB, or RNA 3D Hub)

Description

CspA-27 cotranslational folding intermediate 3

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CGUAAUAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OIG_029 not in the Motif Atlas

Homologous match to HL_6PRV_002

Geometric discrepancy: 0.2197

The information below is about HL_6PRV_002

Detailed Annotation

GNRA wlth tandem sheared

Broad Annotation

No text annotation

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

7OIG|1|1|C|1092
7OIG|1|1|G|1093
7OIG|1|1|U|1094
7OIG|1|1|A|1095
7OIG|1|1|A|1096
7OIG|1|1|U|1097
7OIG|1|1|A|1098
7OIG|1|1|G|1099

Current chains

Chain 1

23S rRNA

Nearby chains

Chain G

50S ribosomal protein L6

Chain e

50S ribosomal protein L36