HL_7OLC_008
3D structure
- PDB id
- 7OLC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermophilic eukaryotic 80S ribosome at idle POST state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UUUGGGAAUG
- Length
- 10 nucleotides
- Bulged bases
- 7OLC|1|1|G|276, 7OLC|1|1|A|277, 7OLC|1|1|A|278
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OLC_008 not in the Motif Atlas
- Homologous match to HL_5TBW_008
- Geometric discrepancy: 0.1462
- The information below is about HL_5TBW_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_77436.2
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 23
Unit IDs
7OLC|1|1|U|271
7OLC|1|1|U|272
7OLC|1|1|U|273
7OLC|1|1|G|274
7OLC|1|1|G|275
7OLC|1|1|G|276
7OLC|1|1|A|277
7OLC|1|1|A|278
7OLC|1|1|U|279
7OLC|1|1|G|280
Current chains
- Chain 1
- 26S rRNA
Nearby chains
- Chain LL
- 60S ribosomal protein L13
- Chain LN
- Ribosomal protein L15
- Chain La
- 60S ribosomal protein L28-like protein
- Chain Lo
- 60S ribosomal protein L44-like protein
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