HL_7OLD_029
3D structure
- PDB id
- 7OLD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UGUAACAA
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OLD_029 not in the Motif Atlas
- Homologous match to HL_8C3A_028
- Geometric discrepancy: 0.1679
- The information below is about HL_8C3A_028
- Detailed Annotation
- GNRA wlth tandem sheared
- Broad Annotation
- No text annotation
- Motif group
- HL_27115.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 22
Unit IDs
7OLD|1|1|U|1250
7OLD|1|1|G|1251
7OLD|1|1|U|1252
7OLD|1|1|A|1253
7OLD|1|1|A|1254
7OLD|1|1|C|1255
7OLD|1|1|A|1256
7OLD|1|1|A|1257
Current chains
- Chain 1
- 26S rRNA
Nearby chains
- Chain C
- Elongation factor 2
- Chain LK
- 60S ribosomal protein L12-like protein
- Chain Lm
- Ubiquitin
- Chain Ls
- 60S acidic ribosomal protein P0
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