HL_7OLD_046
3D structure
- PDB id
- 7OLD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UCUAAUUAAAA
- Length
- 11 nucleotides
- Bulged bases
- 7OLD|1|1|A|2101, 7OLD|1|1|A|2102, 7OLD|1|1|U|2103, 7OLD|1|1|A|2107
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OLD_046 not in the Motif Atlas
- Homologous match to HL_8C3A_046
- Geometric discrepancy: 0.1381
- The information below is about HL_8C3A_046
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_43613.6
- Basepair signature
- cWW-tWH-tWH-F
- Number of instances in this motif group
- 6
Unit IDs
7OLD|1|1|U|2098
7OLD|1|1|C|2099
7OLD|1|1|U|2100
7OLD|1|1|A|2101
7OLD|1|1|A|2102
7OLD|1|1|U|2103
7OLD|1|1|U|2104
7OLD|1|1|A|2105
7OLD|1|1|A|2106
7OLD|1|1|A|2107
7OLD|1|1|A|2108
Current chains
- Chain 1
- 26S rRNA
Nearby chains
- Chain LA
- 60S ribosomal protein L2-like protein
- Chain Lj
- Ribosomal protein L37
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