HL_7OLD_049
3D structure
- PDB id
- 7OLD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GUAACUAUGAC
- Length
- 11 nucleotides
- Bulged bases
- 7OLD|1|1|A|2219
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OLD_049 not in the Motif Atlas
- Homologous match to HL_8C3A_049
- Geometric discrepancy: 0.1954
- The information below is about HL_8C3A_049
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_84702.1
- Basepair signature
- cWW-F-F-tHW-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
7OLD|1|1|G|2216
7OLD|1|1|U|2217
7OLD|1|1|A|2218
7OLD|1|1|A|2219
7OLD|1|1|C|2220
7OLD|1|1|U|2221
7OLD|1|1|A|2222
7OLD|1|1|U|2223
7OLD|1|1|G|2224
7OLD|1|1|A|2225
7OLD|1|1|C|2226
Current chains
- Chain 1
- 26S rRNA
Nearby chains
- Chain 2
- Small subunit ribosomal RNA; SSU rRNA
- Chain C
- Elongation factor 2
- Chain Se
- 40S ribosomal protein S30
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