HL_7OLD_055
3D structure
- PDB id
- 7OLD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UUAAACCAUAACG
- Length
- 13 nucleotides
- Bulged bases
- 7OLD|1|1|A|2596, 7OLD|1|1|C|2603
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OLD_055 not in the Motif Atlas
- Homologous match to HL_8C3A_056
- Geometric discrepancy: 0.1561
- The information below is about HL_8C3A_056
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_19870.9
- Basepair signature
- cWW-tHH-cWW-tHS-F-F-tWW
- Number of instances in this motif group
- 8
Unit IDs
7OLD|1|1|U|2592
7OLD|1|1|U|2593
7OLD|1|1|A|2594
7OLD|1|1|A|2595
7OLD|1|1|A|2596
7OLD|1|1|C|2597
7OLD|1|1|C|2598
7OLD|1|1|A|2599
7OLD|1|1|U|2600
7OLD|1|1|A|2601
7OLD|1|1|A|2602
7OLD|1|1|C|2603
7OLD|1|1|G|2604
Current chains
- Chain 1
- 26S rRNA
Nearby chains
- Chain LI
- 60S ribosomal protein L10-like protein
- Chain LT
- 60S ribosomal protein l21-like protein
- Chain Lb
- 60S ribosomal protein L29
Coloring options: