HL_7OOD_026
3D structure
- PDB id
- 7OOD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mycoplasma pneumoniae 50S subunit of ribosomes in chloramphenicol-treated cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GGAUAAGC
- Length
- 8 nucleotides
- Bulged bases
- 7OOD|1|3|U|994, 7OOD|1|3|G|997
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OOD_026 not in the Motif Atlas
- Geometric match to HL_5J7L_179
- Geometric discrepancy: 0.1387
- The information below is about HL_5J7L_179
- Detailed Annotation
- GNRA related
- Broad Annotation
- GNRA related
- Motif group
- HL_04783.2
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
7OOD|1|3|G|991
7OOD|1|3|G|992
7OOD|1|3|A|993
7OOD|1|3|U|994
7OOD|1|3|A|995
7OOD|1|3|A|996
7OOD|1|3|G|997
7OOD|1|3|C|998
Current chains
- Chain 3
- 23S ribosomal RNA
Nearby chains
- Chain l
- 50S ribosomal protein L16
Coloring options: