HL_7OOD_051

3D structure

PDB id

7OOD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mycoplasma pneumoniae 50S subunit of ribosomes in chloramphenicol-treated cells

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CGCUAG

Length

6 nucleotides

Bulged bases

7OOD|1|3|C|2152

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OOD_051 not in the Motif Atlas

Homologous match to HL_9DFE_049

Geometric discrepancy: 0.5369

The information below is about HL_9DFE_049

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OOD|1|3|C|2150
7OOD|1|3|G|2151
7OOD|1|3|C|2152
7OOD|1|3|U|2153
7OOD|1|3|A|2154
7OOD|1|3|G|2155

Current chains

Chain 3

23S ribosomal RNA

Nearby chains