HL_7OSA_004

3D structure

PDB id

7OSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CUCAGAG

Length

7 nucleotides

Bulged bases

7OSA|1|18S|A|198

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OSA_004 not in the Motif Atlas

Geometric match to HL_8KAH_003

Geometric discrepancy: 0.3928

The information below is about HL_8KAH_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_89457.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

2

Unit IDs

7OSA|1|18S|C|184
7OSA|1|18S|U|185
7OSA|1|18S|C|186
7OSA|1|18S|A|198
7OSA|1|18S|G|199
7OSA|1|18S|A|200
7OSA|1|18S|G|201

Current chains

Chain 18S

18S rRNA

Nearby chains

Chain eS8

40S ribosomal protein S8