HL_7OSA_054

3D structure

PDB id

7OSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GUCUUC

Length

6 nucleotides

Bulged bases

7OSA|1|25S|C|765

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OSA_054 not in the Motif Atlas

Homologous match to HL_8C3A_018

Geometric discrepancy: 0.3567

The information below is about HL_8C3A_018

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_84570.1

Basepair signature

cWW-cWW-F

Number of instances in this motif group

6

Unit IDs

7OSA|1|25S|G|763
7OSA|1|25S|U|764
7OSA|1|25S|C|765
7OSA|1|25S|U|766
7OSA|1|25S|U|767
7OSA|1|25S|C|768

Current chains

Chain 25S

25S rRNA

Nearby chains

Chain eL13

60S ribosomal protein L13