3D structure

PDB id
7OSA (explore in PDB, NAKB, or RNA 3D Hub)
Description
Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
GUCUUC
Length
6 nucleotides
Bulged bases
7OSA|1|25S|C|765
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7OSA_054 not in the Motif Atlas
Homologous match to HL_8C3A_018
Geometric discrepancy: 0.3567
The information below is about HL_8C3A_018
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_84570.1
Basepair signature
cWW-cWW-F
Number of instances in this motif group
6

Unit IDs

7OSA|1|25S|G|763
7OSA|1|25S|U|764
7OSA|1|25S|C|765
7OSA|1|25S|U|766
7OSA|1|25S|U|767
7OSA|1|25S|C|768

Current chains

Chain 25S
25S rRNA

Nearby chains

Chain eL13
60S ribosomal protein L13

Coloring options:


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