HL_7OSA_057

3D structure

PDB id

7OSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GCGAAAGAC

Length

9 nucleotides

Bulged bases

7OSA|1|25S|A|913, 7OSA|1|25S|G|916

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OSA_057 not in the Motif Atlas

Homologous match to HL_8P9A_133

Geometric discrepancy: 0.0511

The information below is about HL_8P9A_133

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_92598.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

13

Unit IDs

7OSA|1|25S|G|910
7OSA|1|25S|C|911
7OSA|1|25S|G|912
7OSA|1|25S|A|913
7OSA|1|25S|A|914
7OSA|1|25S|A|915
7OSA|1|25S|G|916
7OSA|1|25S|A|917
7OSA|1|25S|C|918

Current chains

Chain 25S

25S rRNA

Nearby chains

Chain eL15

60S ribosomal protein L15-A

Chain eL37

Ribosomal protein L37

Chain uL2

60S ribosomal protein L2-B