HL_7OSA_058

3D structure

PDB id

7OSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CCUCAG

Length

6 nucleotides

Bulged bases

7OSA|1|25S|C|959, 7OSA|1|25S|A|962

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OSA_058 not in the Motif Atlas

Homologous match to HL_8P9A_134

Geometric discrepancy: 0.3213

The information below is about HL_8P9A_134

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_70782.2

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

7OSA|1|25S|C|958
7OSA|1|25S|C|959
7OSA|1|25S|U|960
7OSA|1|25S|C|961
7OSA|1|25S|A|962
7OSA|1|25S|G|963

Current chains

Chain 25S

25S rRNA

Nearby chains

Chain eL29

60S ribosomal protein L29

Chain eL42

BJ4_G0001880.mRNA.1.CDS.1

Chain uL15

60S ribosomal protein L28