HL_7OSA_065
3D structure
- PDB id
- 7OSA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UUGAUAUGAUG
- Length
- 11 nucleotides
- Bulged bases
- 7OSA|1|25S|G|1349, 7OSA|1|25S|A|1352, 7OSA|1|25S|U|1353, 7OSA|1|25S|G|1354, 7OSA|1|25S|U|1356
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OSA_065 not in the Motif Atlas
- Homologous match to HL_8P9A_141
- Geometric discrepancy: 0.5389
- The information below is about HL_8P9A_141
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_29762.1
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 1
Unit IDs
7OSA|1|25S|U|1347
7OSA|1|25S|U|1348
7OSA|1|25S|G|1349
7OSA|1|25S|A|1350
7OSA|1|25S|U|1351
7OSA|1|25S|A|1352
7OSA|1|25S|U|1353
7OSA|1|25S|G|1354
7OSA|1|25S|A|1355
7OSA|1|25S|U|1356
7OSA|1|25S|G|1357
Current chains
- Chain 25S
- 25S rRNA
Nearby chains
- Chain eL18
- BJ4_G0033900.mRNA.1.CDS.1
- Chain eL32
- HN1_G0013350.mRNA.1.CDS.1
- Chain eL6
- 60S ribosomal protein L6
- Chain uL4
- BJ4_G0008850.mRNA.1.CDS.1
Coloring options: