HL_7OSA_068

3D structure

PDB id

7OSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

AGCAGUU

Length

7 nucleotides

Bulged bases

7OSA|1|25S|G|1507, 7OSA|1|25S|U|1511

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OSA_068 not in the Motif Atlas

Homologous match to HL_8P9A_144

Geometric discrepancy: 0.1335

The information below is about HL_8P9A_144

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_57176.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

14

Unit IDs

7OSA|1|25S|A|1506
7OSA|1|25S|G|1507
7OSA|1|25S|C|1508
7OSA|1|25S|A|1509
7OSA|1|25S|G|1510
7OSA|1|25S|U|1511
7OSA|1|25S|U|1512

Current chains

Chain 25S

25S rRNA

Nearby chains

Chain eL19

60S ribosomal protein L19-A

Chain uL22

BJ4_G0005750.mRNA.1.CDS.1