HL_7OSA_077
3D structure
- PDB id
- 7OSA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CGCAGCAG
- Length
- 8 nucleotides
- Bulged bases
- 7OSA|1|25S|C|1846, 7OSA|1|25S|G|1848, 7OSA|1|25S|A|1850
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OSA_077 not in the Motif Atlas
- Homologous match to HL_8P9A_152
- Geometric discrepancy: 0.0871
- The information below is about HL_8P9A_152
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_89567.2
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 8
Unit IDs
7OSA|1|25S|C|1844
7OSA|1|25S|G|1845
7OSA|1|25S|C|1846
7OSA|1|25S|A|1847
7OSA|1|25S|G|1848
7OSA|1|25S|C|1849
7OSA|1|25S|A|1850
7OSA|1|25S|G|1851
Current chains
- Chain 25S
- 25S rRNA
Nearby chains
- Chain eL37
- Ribosomal protein L37
- Chain eL39
- 60S ribosomal protein L39
- Chain uL22
- BJ4_G0005750.mRNA.1.CDS.1
- Chain uL4
- BJ4_G0008850.mRNA.1.CDS.1
Coloring options: