HL_7OSA_092

3D structure

PDB id

7OSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UUAAACGAUAACG

Length

13 nucleotides

Bulged bases

7OSA|1|25S|A|2637, 7OSA|1|25S|C|2644

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OSA_092 not in the Motif Atlas

Homologous match to HL_8P9A_166

Geometric discrepancy: 0.0769

The information below is about HL_8P9A_166

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91939.2

Basepair signature

cWW-tSH-tHH-tWW-F-F-F

Number of instances in this motif group

8

Unit IDs

7OSA|1|25S|U|2633
7OSA|1|25S|U|2634
7OSA|1|25S|A|2635
7OSA|1|25S|A|2636
7OSA|1|25S|A|2637
7OSA|1|25S|C|2638
7OSA|1|25S|G|2639
7OSA|1|25S|A|2640
7OSA|1|25S|U|2641
7OSA|1|25S|A|2642
7OSA|1|25S|A|2643
7OSA|1|25S|C|2644
7OSA|1|25S|G|2645

Current chains

Chain 25S

25S rRNA

Nearby chains

Chain eL21

BJ4_G0003770.mRNA.1.CDS.1

Chain eL29

60S ribosomal protein L29

Chain uL16

60S ribosomal protein L10