HL_7OSA_111

3D structure

PDB id

7OSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GUAUUC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OSA_111 not in the Motif Atlas

Homologous match to HL_8P9A_189

Geometric discrepancy: 0.3519

The information below is about HL_8P9A_189

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_86883.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

2

Unit IDs

7OSA|1|58S|G|124
7OSA|1|58S|U|125
7OSA|1|58S|A|126
7OSA|1|58S|U|127
7OSA|1|58S|U|128
7OSA|1|58S|C|129

Current chains

Chain 58S

5.8S rRNA

Nearby chains

Chain 25S

Large subunit ribosomal RNA; LSU rRNA