3D structure

PDB id
7OSA (explore in PDB, NAKB, or RNA 3D Hub)
Description
Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
GUAUUC
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7OSA_111 not in the Motif Atlas
Homologous match to HL_8P9A_189
Geometric discrepancy: 0.3519
The information below is about HL_8P9A_189
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_86883.1
Basepair signature
cWW-F-F-F
Number of instances in this motif group
2

Unit IDs

7OSA|1|58S|G|124
7OSA|1|58S|U|125
7OSA|1|58S|A|126
7OSA|1|58S|U|127
7OSA|1|58S|U|128
7OSA|1|58S|C|129

Current chains

Chain 58S
5.8S rRNA

Nearby chains

Chain 25S
Large subunit ribosomal RNA; LSU rRNA

Coloring options:


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