HL_7OSA_121

3D structure

PDB id

7OSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CCAUUCGG

Length

8 nucleotides

Bulged bases

7OSA|1|25S|U|2571, 7OSA|1|25S|C|2572

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OSA_121 not in the Motif Atlas

Geometric match to HL_3FOZ_004

Geometric discrepancy: 0.2808

The information below is about HL_3FOZ_004

Detailed Annotation

tRNA D-loop

Broad Annotation

No text annotation

Motif group

HL_45175.1

Basepair signature

cWW-cWS-F-F

Number of instances in this motif group

5

Unit IDs

7OSA|1|25S|C|2567
7OSA|1|25S|C|2568
7OSA|1|25S|A|2569
7OSA|1|25S|U|2570
7OSA|1|25S|U|2571
7OSA|1|25S|C|2572
7OSA|1|25S|G|2573
7OSA|1|25S|G|2574

Current chains

Chain 25S

25S rRNA

Nearby chains

Chain eL27

60S ribosomal protein L27