HL_7OSA_123
3D structure
- PDB id
- 7OSA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GUGAAUUGCAGAAUUCCGUGAAUC
- Length
- 24 nucleotides
- Bulged bases
- 7OSA|1|58S|C|84, 7OSA|1|58S|U|86, 7OSA|1|58S|U|90
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OSA_123 not in the Motif Atlas
- Homologous match to HL_8C3A_075
- Geometric discrepancy: 0.3535
- The information below is about HL_8C3A_075
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_07882.1
- Basepair signature
- cWW-F-F-tSH-tHS-F-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
7OSA|1|58S|G|68
7OSA|1|58S|U|69
7OSA|1|58S|G|70
7OSA|1|58S|A|71
7OSA|1|58S|A|72
7OSA|1|58S|U|73
7OSA|1|58S|U|74
7OSA|1|58S|G|75
7OSA|1|58S|C|76
7OSA|1|58S|A|77
7OSA|1|58S|G|78
7OSA|1|58S|A|79
7OSA|1|58S|A|80
7OSA|1|58S|U|81
7OSA|1|58S|U|82
7OSA|1|58S|C|83
7OSA|1|58S|C|84
7OSA|1|58S|G|85
7OSA|1|58S|U|86
7OSA|1|58S|G|87
7OSA|1|58S|A|88
7OSA|1|58S|A|89
7OSA|1|58S|U|90
7OSA|1|58S|C|91
Current chains
- Chain 58S
- 5.8S rRNA
Nearby chains
- Chain 25S
- Large subunit ribosomal RNA; LSU rRNA
- Chain eL37
- Ribosomal protein L37
- Chain eL39
- 60S ribosomal protein L39
- Chain uL24
- 60S ribosomal protein L26-A
- Chain uL29
- BJ4_G0044250.mRNA.1.CDS.1
Coloring options: