HL_7OSA_124
3D structure
- PDB id
- 7OSA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UUCCCGUCCGAUCA
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OSA_124 not in the Motif Atlas
- Homologous match to HL_8C3A_228
- Geometric discrepancy: 0.1097
- The information below is about HL_8C3A_228
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50688.1
- Basepair signature
- cWW-cWS-F-tSW-F-tSH-tSH-cWW-F-F
- Number of instances in this motif group
- 2
Unit IDs
7OSA|1|AB|U|32
7OSA|1|AB|U|33
7OSA|1|AB|C|34
7OSA|1|AB|C|35
7OSA|1|AB|C|36
7OSA|1|AB|G|37
7OSA|1|AB|U|38
7OSA|1|AB|C|39
7OSA|1|AB|C|40
7OSA|1|AB|G|41
7OSA|1|AB|A|42
7OSA|1|AB|U|43
7OSA|1|AB|C|44
7OSA|1|AB|A|45
Current chains
- Chain AB
- 5S
Nearby chains
- Chain 25S
- Large subunit ribosomal RNA; LSU rRNA
- Chain uL18
- 60S ribosomal protein L5
- Chain uL5
- BJ4_G0027750.mRNA.1.CDS.1
Coloring options: