HL_7OSM_008
3D structure
- PDB id
- 7OSM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UAAGGG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OSM_008 not in the Motif Atlas
- Homologous match to HL_4V88_194
- Geometric discrepancy: 0.1241
- The information below is about HL_4V88_194
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50142.3
- Basepair signature
- cWW-cWW-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
7OSM|1|18S|U|368
7OSM|1|18S|A|369
7OSM|1|18S|A|370
7OSM|1|18S|G|371
7OSM|1|18S|G|372
7OSM|1|18S|G|373
Current chains
- Chain 18S
- 18S rRNA
Nearby chains
- Chain uS12
- 40S ribosomal protein S23
- Chain uS17
- 40S ribosomal protein S11-B
- Chain uS4
- BJ4_G0026100.mRNA.1.CDS.1
- Chain uS5
- 40S ribosomal protein S2
- Chain uS8
- 40S ribosomal protein S22-A
Coloring options: