HL_7OSM_009
3D structure
- PDB id
- 7OSM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CCUGAGAAACGG
- Length
- 12 nucleotides
- Bulged bases
- 7OSM|1|18S|C|402, 7OSM|1|18S|G|403
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OSM_009 not in the Motif Atlas
- Homologous match to HL_4V88_195
- Geometric discrepancy: 0.0958
- The information below is about HL_4V88_195
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_06226.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
7OSM|1|18S|C|393
7OSM|1|18S|C|394
7OSM|1|18S|U|395
7OSM|1|18S|G|396
7OSM|1|18S|A|397
7OSM|1|18S|G|398
7OSM|1|18S|A|399
7OSM|1|18S|A|400
7OSM|1|18S|A|401
7OSM|1|18S|C|402
7OSM|1|18S|G|403
7OSM|1|18S|G|404
Current chains
- Chain 18S
- 18S rRNA
Nearby chains
- Chain eS24
- 40S ribosomal protein S24
- Chain eS4
- 40S ribosomal protein S4
- Chain eS6
- 40S ribosomal protein S6
- Chain eS8
- 40S ribosomal protein S8
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