HL_7OSM_018

3D structure

PDB id

7OSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CGUAUUG

Length

7 nucleotides

Bulged bases

7OSM|1|18S|A|780, 7OSM|1|18S|U|782

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OSM_018 not in the Motif Atlas

Geometric match to HL_8C3A_054

Geometric discrepancy: 0.2248

The information below is about HL_8C3A_054

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

7OSM|1|18S|C|777
7OSM|1|18S|G|778
7OSM|1|18S|U|779
7OSM|1|18S|A|780
7OSM|1|18S|U|781
7OSM|1|18S|U|782
7OSM|1|18S|G|783

Current chains

Chain 18S

18S rRNA

Nearby chains

Chain eS24

40S ribosomal protein S24

Chain uS4

BJ4_G0026100.mRNA.1.CDS.1