HL_7OSM_024
3D structure
- PDB id
- 7OSM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- AGAAAU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OSM_024 not in the Motif Atlas
- Homologous match to HL_4V88_210
- Geometric discrepancy: 0.1138
- The information below is about HL_4V88_210
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.2
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 360
Unit IDs
7OSM|1|18S|A|1084
7OSM|1|18S|G|1085
7OSM|1|18S|A|1086
7OSM|1|18S|A|1087
7OSM|1|18S|A|1088
7OSM|1|18S|U|1089
Current chains
- Chain 18S
- 18S rRNA
Nearby chains
- Chain eS26
- 40S ribosomal protein S26
- Chain uS5
- 40S ribosomal protein S2
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