HL_7OSM_048

3D structure

PDB id

7OSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CCUCGG

Length

6 nucleotides

Bulged bases

7OSM|1|25S|U|545

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OSM_048 not in the Motif Atlas

Homologous match to HL_5TBW_012

Geometric discrepancy: 0.443

The information below is about HL_5TBW_012

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13963.1

Basepair signature

cWW-F-F

Number of instances in this motif group

7

Unit IDs

7OSM|1|25S|C|543
7OSM|1|25S|C|544
7OSM|1|25S|U|545
7OSM|1|25S|C|546
7OSM|1|25S|G|547
7OSM|1|25S|G|548

Current chains

Chain 25S

25S rRNA

Nearby chains