HL_7OSM_074

3D structure

PDB id

7OSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GUUUAUC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OSM_074 not in the Motif Atlas

Homologous match to HL_5TBW_038

Geometric discrepancy: 0.1092

The information below is about HL_5TBW_038

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75033.1

Basepair signature

cWW-cWW-F-F-F

Number of instances in this motif group

3

Unit IDs

7OSM|1|25S|G|1719
7OSM|1|25S|U|1720
7OSM|1|25S|U|1721
7OSM|1|25S|U|1722
7OSM|1|25S|A|1723
7OSM|1|25S|U|1724
7OSM|1|25S|C|1725

Current chains

Chain 25S

25S rRNA

Nearby chains

Chain eL19

60S ribosomal protein L19-A

Chain eL43

60S ribosomal protein L43-A